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清华大学学报(自然科学版)  2017, Vol. 57 Issue (8): 821-825    DOI: 10.16511/j.cnki.qhdxxb.2017.22.044
  工程物理 本期目录 | 过刊浏览 | 高级检索 |
基于早期监测病例的埃博拉病毒传播风险评估
马勋, 倪顺江, 申世飞
清华大学 工程物理系, 公共安全研究院, 北京 100084
Risk evaluation of Ebola spreading based on early reported cases
MA Xun, NI Shunjiang, SHEN Shifei
Institute of Public Safety Research, Department of Engineering Physics, Tsinghua University, Beijing 100084, China
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摘要 基本再生数是传染病动力学中反映传染病传播潜力最重要的参数,对基本再生数的估算是传染病传播风险评估工作的核心内容。该文针对2013年末发生于西非的埃博拉疫情的风险评估问题,提出了改进的最小二乘法作为疫情参数拟合方法,并对该次埃博拉疫情中3个重灾区国家(几内亚、塞拉利昂、利比里亚)境内的早期疫情数据进行了拟合,估算出了疫情的基本再生数,拟合结果与实际数据吻合得较好;通过分析几内亚境内疫情的早期数据,改进前人研究中所采用的基于均匀混合假设的易感者S(susceptible)、携带者E(exposed)、传染者I(infectious)以及移出者R(removed)(SEIR)模型,提出了多次疫情假说模型,较好地解释了几内亚境内疫情数据波动现象。该文提出的拟合标准和传染病动力学建模思路对于确定病毒传播性质、评估防疫措施效果、预测传播趋势以及遏制未来可能出现的疫情有着重要意义。
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马勋
倪顺江
申世飞
关键词 埃博拉病毒传染病传播基本再生数最小二乘法SEIR模型    
Abstract:The basic reproductive number is the most important parameter for measuring epidemic potential and assessing the disease spreading risk. To assess the 2013 Ebola virus spreading risk, a modified least squares method is used to fit the data to give a more self-consistent theoretical basis. Very early Ebola epidemic data sets from the three hardest hit countries in West Africa (Guinea, Sierra Leone and Liberia) are fit to calculate the basic reproductive number with the results in good agreement with the actual spread. A risk evaluation model which uses an extended susceptible, exposed, infectious, and removed (SEIR) model based on the multi-epidemic hypothesis gives better predictions than the uniformly mixed assumption based SEIR model used in previous studies. The model and fitting method can help predict virus propagation, assess the effects of control measures, and predict the future trends of the epidemic spread to enable better containment of future epidemics.
Key wordsEbola virus    epidemic spreading    basic reproduction number    least squares method    susceptible,exposed,infectious,and removed (SEIR) model
收稿日期: 2017-01-07      出版日期: 2017-08-15
ZTFLH:  R183  
通讯作者: 倪顺江,助理研究员,E-mail:sjni@tsinghua.edu.cn     E-mail: sjni@tsinghua.edu.cn
引用本文:   
马勋, 倪顺江, 申世飞. 基于早期监测病例的埃博拉病毒传播风险评估[J]. 清华大学学报(自然科学版), 2017, 57(8): 821-825.
MA Xun, NI Shunjiang, SHEN Shifei. Risk evaluation of Ebola spreading based on early reported cases. Journal of Tsinghua University(Science and Technology), 2017, 57(8): 821-825.
链接本文:  
http://jst.tsinghuajournals.com/CN/10.16511/j.cnki.qhdxxb.2017.22.044  或          http://jst.tsinghuajournals.com/CN/Y2017/V57/I8/821
  图1 SEIR 模型示意图
  图2 几内亚的早期数据拟合
  图3 塞拉利昂的早期数据拟合
  图4 利比里亚的早期数据拟合
  图5 几内亚的早期数据拟合(多次疫情假说模型)
  表1 拟合结果残差平方和的平均值
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